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DATA QUALITY · SELF-OBSERVATION 001
iCIDM found a classification boundary worth reviewing.
The current technology classifier labels 14 pre-2005 records as containing “Whole-genome sequencing”. Their titles instead include partial sequence analysis, gene sequencing, genotyping, PCR/sequencing and multilocus sequence typing. That does not prove every label is wrong; it is enough to trigger review.
From error hiding to institutional learning
Observe classification → Detect anomaly → Inspect source record → Colleague judgement → Correct / confirm → Record lesson → Improve rule → Re-run population
Review queue · 14 records
| ID | Year | Title | Current technology label | Action |
|---|---|---|---|---|
| CPD-0001 | 1995 | Partial nucleotide sequence analysis of the first case of human T lymphotropic virus type II from Australia. | Whole-genome sequencing | inspect |
| CPD-0059 | 1997 | Cloning, sequence, and expression of a blood group B active recombinant alpha-D-galactosidase from pinto bean (Phaseolus vulgaris). | Whole-genome sequencing | inspect |
| CPD-0062 | 1997 | First human immunodeficiency virus type 1 sequences in the V3 region, nef and vpr genes from Papua New Guinea. | Whole-genome sequencing; Serology / immunology | inspect |
| CPD-0085 | 1997 | HIV type 1 V3 loop sequences derived from peripheral blood of transmitting mothers, their infants, and nontransmitting mothers differ in their crown octapeptide motifs. | Whole-genome sequencing | inspect |
| CPD-0089 | 1998 | Unique HIV type 1 V3 region sequences derived from six different regions of brain: region-specific evolution within host-determined quasispecies. | Whole-genome sequencing | inspect |
| CPD-0126 | 1999 | Mycobacterium tuberculosis rpoB gene DNA sequencing: implications for detection of rifamycin resistance. | Whole-genome sequencing; Culture / phenotypic methods | inspect |
| CPD-0129 | 1999 | Significance of plasma and peripheral blood mononuclear cell derived HIV-1 sequences in establishing epidemiologic linkage between two individuals multiply exposed to HIV-1. | Whole-genome sequencing; Culture / phenotypic methods | inspect |
| CPD-0141 | 2000 | Molecular genotyping of human Ureaplasma species based on multiple-banded antigen (MBA) gene sequences. | Whole-genome sequencing; PCR / molecular diagnostics; Culture / phenotypic methods | inspect |
| CPD-0159 | 2001 | Partial sequence analysis of the actin gene and its potential for studying the phylogeny of Candida species and their teleomorphs. | Whole-genome sequencing; Culture / phenotypic methods | inspect |
| CPD-0191 | 2002 | Molecular diagnostics in infectious diseases and public health microbiology: cottage industry to postgenomics. | Whole-genome sequencing; PCR / molecular diagnostics; Culture / phenotypic methods | inspect |
| CPD-0195 | 2002 | Serotype identification of group B streptococci by PCR and sequencing. | Whole-genome sequencing; PCR / molecular diagnostics; Culture / phenotypic methods | inspect |
| CPD-0230 | 2003 | Characterization of the natural population of Bartonella henselae by multilocus sequence typing. | Whole-genome sequencing; Culture / phenotypic methods | inspect |
| CPD-0234 | 2003 | Using cpsA-cpsB sequence polymorphisms and serotype-/group-specific PCR to predict 51 Streptococcus pneumoniae capsular serotypes. | Whole-genome sequencing; PCR / molecular diagnostics; Culture / phenotypic methods | inspect |
| CPD-0266 | 2004 | Postgenomic taxonomy of human ureaplasmas -- a case study based on multiple gene sequences. | Whole-genome sequencing; Culture / phenotypic methods | inspect |
Suggested review outcomes
Evidence boundary: this page reports a machine-detected taxonomy inconsistency candidate. It does not retroactively reinterpret the publications and does not claim modern WGS was performed in those early studies. Final classification should be reviewed against methods/full text and the intended technology ontology.