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User-confirmed CIDM personnel authorship rule applies; same-name safeguard retained.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/15707165/", "period": "2004–2008", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:15494902", "record_id": "CPD-0269", "year": "2004", "pmid": "15494902", "doi": "10.1086/425125", "title": "Disseminated pyogenic Mycoplasma pneumoniae infection in a renal transplant recipient, detected by broad-range polymerase chain reaction.", "class": "GREEN-B_REVIEW", "action": "HOLD_POLICY", "evidence_type": "FINAL_R26", "basis": "Oxford full article/reprint information gives Matthew V. N. O'Sullivan's correspondence/reprint address as Centre for Infectious Diseases and Microbiology Laboratory Services, ICPMR, Westmead Hospital. 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User-confirmed CIDM personnel authorship rule applies; same-name safeguard retained.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/15381803/", "period": "2004–2008", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:14527970", "record_id": "CPD-0280", "year": "2004", "pmid": "14527970", "doi": "10.1197/jamia.m1166", "title": "Comparative impact of guidelines, clinical data, and decision support on prescribing decisions: an interactive web experiment with simulated cases.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "FINAL_R26", "basis": "PMC full article author affiliations explicitly list Jonathan R Iredell at Centre for Infectious Diseases and Microbiology, Westmead Hospital, and Gwendolyn L Gilbert at Centre for Infectious Diseases and Microbiology Laboratory Services, ICPMR, Westmead Hospital.", "source_url": "https://pmc.ncbi.nlm.nih.gov/articles/PMC305460/", "period": "2004–2008", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:15054171", "record_id": "CPD-0281", "year": "2004", "pmid": "15054171", "doi": "10.1136/sti.2003.006783", "title": "HSV type specific serology in sexual health clinics: use, benefits, and who gets tested.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "FINAL_R26", "basis": "R24 author-based historical CIDM reclassification. 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PubMed source retained.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/18790049/", "period": "2004–2008", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:18400542", "record_id": "CPD-0497", "year": "2008", "pmid": "18400542", "doi": "10.1016/j.ijid.2008.01.011", "title": "The seroepidemiology of Helicobacter pylori infection in Australia.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "FINAL_R26", "basis": "Verified intended author Gwendolyn L. (Lyn) Gilbert; user-approved author rule classifies verified Gilbert papers as GREEN-A for CIDM inclusion.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/18400542/", "period": "2004–2008", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:18651305", "record_id": "CPD-0498", "year": "2008", "pmid": "18651305", "doi": "10.1080/13693780802210734", "title": "Association between fertility and molecular sub-type of global isolates of Cryptococcus gattii molecular type VGII.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "FINAL_R26", "basis": "PubMed/Oxford article-level affiliation explicitly: Molecular Mycology Research Laboratory, Centre for Infectious Diseases and Microbiology, Westmead Hospital; also CIDM, Westmead Millennium Institute, University of Sydney.", "source_url": "https://academic.oup.com/mmy/article-abstract/46/7/665/970245", "period": "2004–2008", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:18844686", "record_id": "CPD-0499", "year": "2008", "pmid": "18844686", "doi": "10.1111/j.1469-0691.2008.02052.x", "title": "Difficulties in detection and identification of Enterococcus faecium with low-level inducible resistance to vancomycin, during a hospital outbreak.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "FINAL_R26", "basis": "Wiley/PubMed: paper-level affiliation = Centre for Infectious Diseases and Microbiology, ICPMR, Westmead Hospital.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/18844686/", "period": "2004–2008", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:18552700", "record_id": "CPD-0500", "year": "2008", "pmid": "18552700", "doi": "10.1097/ccm.0b013e3181760f42", "title": "Candidemia in nonneutropenic critically ill patients: risk factors for non-albicans Candida spp.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "FINAL_R26", "basis": "Verified intended author Tania C. Sorrell; user-approved author rule classifies verified Sorrell papers as GREEN-A for CIDM inclusion.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/18552700/", "period": "2004–2008", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:18765698", "record_id": "CPD-0502", "year": "2008", "pmid": "18765698", "doi": "10.7326/0003-4819-149-5-200809020-00003", "title": "Risk for opportunistic disease and death after reinitiating continuous antiretroviral therapy in patients with HIV previously receiving episodic therapy: a randomized trial.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "FINAL_R26", "basis": "R26 closure: user directly confirmed this record as a CIDM publication. Classified GREEN-A under historical CIDM inclusion rule; provenance is user historical confirmation rather than recovered direct paper-level CIDM affiliation.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/18765698/", "period": "2004–2008", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:18988320", "record_id": "CPD-0503", "year": "2008", "pmid": "18988320", "doi": "10.1097/qco.0b013e3283118932", "title": "Decision support systems for antibiotic prescribing.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "FINAL_R26", "basis": "PubMed: Centre for Infectious Diseases and Microbiology, ICPMR, Westmead Hospital.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/18988320/", "period": "2004–2008", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:18453098", "record_id": "CPD-0504", "year": "2008", "pmid": "18453098", "doi": "10.1007/978-1-60327-148-6_18", "title": "Developing decision support systems in clinical bioinformatics.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "FINAL_R26", "basis": "Direct paper-level marker: PubMed lists Vitali Sintchenko at Centre for Infectious Diseases and Microbiology-Public Health, Western Clinical School, University of Sydney.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/18453098/", "period": "2004–2008", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:19007547", "record_id": "CPD-0505", "year": "2008", "pmid": "19007547", "doi": "10.1071/nb07005", "title": "The re-emergence of pertussis: implications for diagnosis and surveillance.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "FINAL_R26", "basis": "PubMed: Centre for Infectious Diseases and Microbiology-Public Health, Sydney West Area Health Service / University of Sydney.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/19007547/", "period": "2004–2008", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:19006509", "record_id": "CPD-0506", "year": "2008", "pmid": "19006509", "doi": "10.1111/j.1708-8305.2008.00223.x", "title": "Leishmaniasis, an emerging imported infection: report of 20 cases from Australia.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "FINAL_R26", "basis": "R24 author-based historical CIDM reclassification. Verified intended author list includes Rogan Lee. User-confirmed CIDM personnel authorship rule applies; same-name safeguard retained.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/19006509/", "period": "2004–2008", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:18476292", "record_id": "CPD-0507", "year": "2008", "pmid": "18476292", "doi": "10.1086/586713", "title": "Major clinical outcomes in antiretroviral therapy (ART)-naive participants and in those not receiving ART at baseline in the SMART study.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "FINAL_R26", "basis": "SMART Study Group expanded collaborator list includes D. E. Dwyer. User-confirmed Dwyer involvement, including investigator/collaborator role, qualifies as GREEN-A.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/18476292/", "period": "2004–2008", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:18476293", "record_id": "CPD-0508", "year": "2008", "pmid": "18476293", "doi": "10.1086/529523", "title": "Inferior clinical outcome of the CD4+ cell count-guided antiretroviral treatment interruption strategy in the SMART study: role of CD4+ Cell counts and HIV RNA levels during follow-up.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "FINAL_R26", "basis": "SMART Study Group expanded collaborator list includes D. E. Dwyer. User-confirmed Dwyer involvement, including investigator/collaborator role, qualifies as GREEN-A.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/18476293/", "period": "2004–2008", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:18604741", "record_id": "CPD-0509", "year": "2008", "pmid": "18604741", "doi": "10.1080/00313020802197921", "title": "High prevalence of a class 1 integron-associated aadB gene cassette in Pseudomonas aeruginosa isolates from an Australian cystic fibrosis patient population.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "FINAL_R26", "basis": "Publisher article metadata/full article: Jon Iredell affiliation explicitly = Centre for Infectious Diseases and Microbiology, University of Sydney, Westmead Hospital.", "source_url": "https://doi.org/10.1080/00313020802197921", "period": "2004–2008", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:18945832", "record_id": "CPD-0510", "year": "2008", "pmid": "18945832", "doi": "10.1128/jcm.01146-08", "title": "Failure of the BD GeneOhm StaphS/R assay for identification of Australian methicillin-resistant Staphylococcus aureus strains: duplex assays as the \"gold standard\" in settings of unknown SCCmec epidemiology.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "FINAL_R26", "basis": "PMC full article: Lee Thomas, Sebastiaan van Hal, Matthew O'Sullivan, Pierre Kyme and Jon Iredell are explicitly affiliated with Centre for Infectious Diseases and Microbiology, Westmead Hospital.", "source_url": "https://pmc.ncbi.nlm.nih.gov/articles/PMC2593280/", "period": "2004–2008", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:18588522", "record_id": "CPD-0511", "year": "2008", "pmid": "18588522", "doi": "10.1111/j.1445-5994.2008.01725.x", "title": "Recommendations for the treatment of established fungal infections.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "FINAL_R26", "basis": "Direct paper-level CIDM evidence recovered. Wiley author affiliation lists Tania C Sorrell at Centre for Infectious Diseases and Microbiology, University of Sydney, Westmead.", "source_url": "https://onlinelibrary.wiley.com/doi/abs/10.1111/j.1445-5994.2008.01725.x", "period": "2004–2008", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:18479962", "record_id": "CPD-0512", "year": "2008", "pmid": "18479962", "doi": "10.1016/j.jcv.2008.03.027", "title": "Differentiation between vaccine and wild-type varicella-zoster virus genotypes by high-resolution melt analysis of single nucleotide polymorphisms.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "FINAL_R26", "basis": "PubMed: Clinical Virology, Centre for Infectious Diseases and Microbiology-Public Health, ICPMR, Westmead.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/18479962/", "period": "2004–2008", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:18513356", "record_id": "CPD-0513", "year": "2008", "pmid": "18513356", "doi": "10.1111/j.1574-6968.2008.01219.x", "title": "In vitro interactions of tobramycin with various nonantibiotics against Pseudomonas aeruginosa and Burkholderia cenocepacia.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "FINAL_R26", "basis": "R24 author-based historical CIDM reclassification. Verified intended author list includes Fred Widmer; Jon Iredell. User-confirmed CIDM personnel authorship rule applies; same-name safeguard retained.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/18513356/", "period": "2004–2008", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:18212110", "record_id": "CPD-0514", "year": "2008", "pmid": "18212110", "doi": "10.1128/aac.01388-07", "title": "Treatment of scedosporiosis with voriconazole: clinical experience with 107 patients.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "FINAL_R26", "basis": "R24 author-based historical CIDM reclassification. Verified intended author list includes Sharon C. A. Chen; Tania C. Sorrell. User-confirmed CIDM personnel authorship rule applies; same-name safeguard retained.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/18212110/", "period": "2004–2008", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:18260818", "record_id": "CPD-0515", "year": "2008", "pmid": "18260818", "doi": "10.1089/fpd.2007.0047", "title": "Age-specific risk factors for sporadic Campylobacter infection in regional Australia.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "FINAL_R26", "basis": "R24 author-based historical CIDM reclassification. Verified intended author list includes Gwendolyn L. Gilbert. User-confirmed CIDM personnel authorship rule applies; same-name safeguard retained.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/18260818/", "period": "2004–2008", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:18205975", "record_id": "CPD-0516", "year": "2008", "pmid": "18205975", "doi": "10.1017/s0950268807000246", "title": "Risk factors for infection with Campylobacter jejuni flaA genotypes.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "FINAL_R26", "basis": "R24 author-based historical CIDM reclassification. Verified intended author list includes G. L. Gilbert; Peter Jelfs. User-confirmed CIDM personnel authorship rule applies; same-name safeguard retained.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/18205975/", "period": "2004–2008", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:18047749", "record_id": "CPD-0517", "year": "2008", "pmid": "18047749", "doi": "10.1017/s0950268807009843", "title": "An outbreak of epidemic keratoconjunctivitis in a regional ophthalmology clinic in New South Wales.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "FINAL_R26", "basis": "R24 author-based historical CIDM reclassification. Verified intended author list includes K. A. McPhie; Dominic E. Dwyer. User-confirmed CIDM personnel authorship rule applies; same-name safeguard retained.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/18047749/", "period": "2004–2008", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:18566140", "record_id": "CPD-0521", "year": "2008", "pmid": "18566140", "doi": "10.1099/jmm.0.47766-0", "title": "Extended phage locus typing of Salmonella enterica serovar Typhimurium, using multiplex PCR-based reverse line blot hybridization.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "FINAL_R26", "basis": "PubMed explicitly: Centre for Infectious Diseases and Microbiology-Public Health, Institute of Clinical Pathology and Medical Research (ICPMR), Westmead, NSW.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/18566140/", "period": "2004–2008", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:18361865", "record_id": "CPD-0522", "year": "2008", "pmid": "18361865", "doi": "10.1071/nb07036", "title": "Salmonella typing in New South Wales: current methods and application of improved epidemiological tools.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "FINAL_R26", "basis": "PubMed explicitly: Centre for Infectious Diseases and Microbiology, Institute of Clinical Pathology and Medical Research, Westmead Hospital.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/18361865/", "period": "2004–2008", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:18085683", "record_id": "CPD-0523", "year": "2008", "pmid": "18085683", "doi": "10.1002/ppul.20749", "title": "A multiplex PCR-based reverse line blot hybridization (mPCR/RLB) assay for detection of bacterial respiratory pathogens in children with pneumonia.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "FINAL_R26", "basis": "Wiley full article: Fanrong Kong and Gwendolyn L. Gilbert affiliations = Centre for Infectious Diseases and Microbiology, ICPMR, Westmead.", "source_url": "https://onlinelibrary.wiley.com/doi/10.1002/ppul.20749", "period": "2004–2008", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:18076665", "record_id": "CPD-0524", "year": "2008", "pmid": "18076665", "doi": "10.1111/j.1469-0691.2007.01890.x", "title": "Use of a multiplex PCR-based reverse line blot (mPCR/RLB) hybridisation assay for the rapid identification of bacterial pathogens.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "FINAL_R26", "basis": "Wiley publisher author affiliations explicitly assign F. Kong, G. L. Gilbert and M. 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Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/19222373/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:19877534", "record_id": "CPD-0555", "year": "2009", "pmid": "19877534", "doi": "10.33321/cdi.2009.33.15", "title": "Arboviral diseases and malaria in Australia, 2007/08: annual report of the National Arbovirus and Malaria Advisory Committee.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "COLLABORATOR_CORE_PERSON", "basis": "PubMed expands the National Arbovirus and Malaria Advisory Committee and lists Richard Russell. Independent historical provenance verifies Richard C. Russell as founding director of the Department of Medical Entomology in CIDM at Westmead. Under the user-approved verified-core-person rule, collaborator authorship qualifies; same-name safeguard retained.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/19877534/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:19285835", "record_id": "CPD-0556", "year": "2009", "pmid": "19285835", "doi": "10.1016/j.ijantimicag.2009.01.013", "title": "Antimicrobial resistance in non-tuberculous mycobacteria in New South Wales, 2002-2008.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Gilbert, Jelfs. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/19285835/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:19828366", "record_id": "CPD-0557", "year": "2009", "pmid": "19828366", "doi": "10.1016/j.jcv.2009.09.019", "title": "Laboratory test performance in young adults during influenza outbreaks at World Youth Day 2008.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Dwyer, McPhie. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/19828366/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:18723122", "record_id": "CPD-0558", "year": "2009", "pmid": "18723122", "doi": "10.1016/j.jbi.2008.07.002", "title": "Biosurveillance of emerging biothreats using scalable genotype clustering.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Gilbert, Sintchenko. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/18723122/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:19527207", "record_id": "CPD-0559", "year": "2009", "pmid": "19527207", "doi": "10.5694/j.1326-5377.2009.tb02641.x", "title": "Infection control, ethics and accountability.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Gilbert. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/19527207/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:19169854", "record_id": "CPD-0560", "year": "2009", "pmid": "19169854", "doi": "10.1007/s00018-009-8765-7", "title": "Chitotriosidase and gene therapy for fungal infections.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Sorrell, Wright. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/19169854/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:19085455", "record_id": "CPD-0561", "year": "2009", "pmid": "19085455", "doi": "10.1080/13693780802510240", "title": "Genotyping of Scedosporium species: a review of molecular approaches.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Chen. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/19085455/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:19549223", "record_id": "CPD-0562", "year": "2009", "pmid": "19549223", "doi": "10.1111/j.1469-0691.2009.02802.x", "title": "Population-based surveillance for scedosporiosis in Australia: epidemiology, disease manifestations and emergence of Scedosporium aurantiacum infection.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Sorrell, Chen. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/19549223/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:19390697", "record_id": "CPD-0563", "year": "2009", "pmid": "19390697", "doi": "10.1371/journal.pone.0005328", "title": "Rapid etiological classification of meningitis by NMR spectroscopy based on metabolite profiles and host response.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "PubMed: Centre for Infectious Diseases and Microbiology and Westmead Millennium Institute, University of Sydney.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/19390697/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:19374621", "record_id": "CPD-0564", "year": "2009", "pmid": "19374621", "doi": "10.5694/j.1326-5377.2009.tb02498.x", "title": "Prolonged varicella viraemia and streptococcal toxic shock syndrome following varicella vaccination of a health care worker.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Dwyer. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/19374621/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:19852216", "record_id": "CPD-0565", "year": "2009", "pmid": "19852216", "doi": "10.2987/09-5908.1", "title": "Arboviruses isolated from mosquitoes collected from urban and peri-urban areas of eastern Australia.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Russell, Webb. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/19852216/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:19861621", "record_id": "CPD-0566", "year": "2009", "pmid": "19861621", "doi": "10.4269/ajtmh.2009.09-0008", "title": "Blood sources of mosquitoes collected from urban and peri-urban environments in eastern Australia with species-specific molecular analysis of avian blood meals.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Russell, Webb. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/19861621/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:19404854", "record_id": "CPD-0567", "year": "2009", "pmid": "19404854", "doi": "10.1080/00313020902908854", "title": "Paradoxical effect of Klebsiella pneumoniae OmpK36 porin deficiency.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Iredell. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/19404854/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:19803727", "record_id": "CPD-0568", "year": "2009", "pmid": "19803727", "doi": "10.1086/606118", "title": "First report of putative Streptococcus pneumoniae serotype 6D among nasopharyngeal isolates from Fijian children.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Gilbert, Kong. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/19803727/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:19535528", "record_id": "CPD-0569", "year": "2009", "pmid": "19535528", "doi": "10.1128/jcm.00484-09", "title": "Simple, accurate, serotype-specific PCR assay to differentiate Streptococcus pneumoniae serotypes 6A, 6B, and 6C.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Gilbert, Kong. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/19535528/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:19320594", "record_id": "CPD-0570", "year": "2009", "pmid": "19320594", "doi": "10.1086/597772", "title": "Scedosporium prolificans osteomyelitis in an immunocompetent child treated with a novel agent, hexadecylphospocholine (miltefosine), in combination with terbinafine and voriconazole: a case report.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Sorrell. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/19320594/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:19848605", "record_id": "CPD-0571", "year": "2009", "pmid": "19848605", "doi": "10.1086/648452", "title": "Molecular epidemiology of invasive aspergillosis: lessons learned from an outbreak investigation in an Australian hematology unit.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Chen. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/19848605/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:19639036", "record_id": "CPD-0573", "year": "2009", "pmid": "19639036", "doi": "10.2174/1874285800903010097", "title": "Assignment of reference 5'-end 16S rDNA sequences and species-specific sequence polymorphisms improves species identification of Nocardia.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Sorrell, Sintchenko, Chen, Kong. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/19639036/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:19895220", "record_id": "CPD-0576", "year": "2009", "pmid": "19895220", "doi": "10.2217/fmb.09.70", "title": "Current status and future perspectives on molecular and serological methods in diagnostic mycology.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Sorrell, Chen. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/19895220/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:19502366", "record_id": "CPD-0577", "year": "2009", "pmid": "19502366", "doi": "10.1099/jmm.0.007484-0", "title": "Identification of non-tuberculous mycobacteria: utility of the GenoType Mycobacterium CM/AS assay compared with HPLC and 16S rRNA gene sequencing.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Gilbert, Sintchenko, Jelfs. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/19502366/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:19900108", "record_id": "CPD-0578", "year": "2009", "pmid": "19900108", "doi": "10.1080/00313020903071447", "title": "Commonly used molecular epidemiology markers of Streptococcus agalactiae do not appear to predict virulence.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Gilbert, Sintchenko, Kong. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/19900108/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:19292914", "record_id": "CPD-0579", "year": "2009", "pmid": "19292914", "doi": "10.1186/1471-2105-10-86", "title": "In silico prioritisation of candidate genes for prokaryotic gene function discovery: an application of phylogenetic profiles.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Sintchenko. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/19292914/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:19193267", "record_id": "CPD-0580", "year": "2009", "pmid": "19193267", "doi": "10.3201/eid1502.081167", "title": "Face mask use and control of respiratory virus transmission in households.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Dwyer. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/19193267/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:19852219", "record_id": "CPD-0581", "year": "2009", "pmid": "19852219", "doi": "10.2987/09-0016.1", "title": "Are commercially available essential oils from Australian native plants repellent to mosquitoes?", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Russell, Webb. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/19852219/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:19594912", "record_id": "CPD-0582", "year": "2009", "pmid": "19594912", "doi": "10.1186/cc7964", "title": "Determinants of mortality in non-neutropenic ICU patients with candidaemia.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Sorrell, Chen. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/19594912/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:19357202", "record_id": "CPD-0583", "year": "2009", "pmid": "19357202", "doi": "10.1128/jcm.00120-09", "title": "Simultaneous identification of 14 genital microorganisms in urine by use of a multiplex PCR-based reverse line blot assay.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Gilbert, Kong. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/19357202/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:19050388", "record_id": "CPD-0584", "year": "2009", "pmid": "19050388", "doi": "10.1097/qad.0b013e32831cc129", "title": "Interruption of antiretroviral therapy is associated with increased plasma cystatin C.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "STUDY_GROUP_COLLABORATOR", "basis": "The paper is by the INSIGHT SMART Study Group. The paper appendix/SMART investigator roster lists DE Dwyer among Australia clinical site investigators. User-approved rule explicitly accepts verified Dwyer investigator/collaborator involvement as GREEN-A; same-name safeguard retained.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/19050388/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:19665385", "record_id": "CPD-0585", "year": "2009", "pmid": "19665385", "doi": "10.1016/j.bmc.2009.07.037", "title": "Synthesis, antifungal, haemolytic and cytotoxic activities of a series of bis(alkylpyridinium)alkanes.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Sorrell, Widmer. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/19665385/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:19618769", "record_id": "CPD-0587", "year": "2009", "pmid": "19618769", "doi": "10.33321/cdi.2009.33.8", "title": "Outbreak of human metapneumovirus infection in a residential aged care facility.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Dwyer, McPhie. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/19618769/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:19416365", "record_id": "CPD-0588", "year": "2009", "pmid": "19416365", "doi": "10.1111/j.1574-6976.2009.00175.x", "title": "Gene cassettes and cassette arrays in mobile resistance integrons.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Iredell. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/19416365/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:19679232", "record_id": "CPD-0590", "year": "2009", "pmid": "19679232", "doi": "10.1016/j.diagmicrobio.2009.05.007", "title": "Comparison of results of fluconazole and voriconazole disk diffusion testing for Candida spp. with results from a central reference laboratory in the ARTEMIS DISK Global Antifungal Surveillance Program.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "STUDY_GROUP_COLLABORATOR", "basis": "PubMed expands the ARTEMIS DISK Global Antifungal Surveillance Group and lists Sharon Chen. Sharon C-A Chen is verified CIDM core; collaborator/group authorship therefore qualifies as GREEN-A under the current rule.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/19679232/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:19756510", "record_id": "CPD-0591", "year": "2009", "pmid": "19756510", "doi": "10.1007/s00134-009-1619-9", "title": "Assessment of clinical risk predictive rules for invasive candidiasis in a prospective multicentre cohort of ICU patients.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Sorrell. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/19756510/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:19573567", "record_id": "CPD-0592", "year": "2009", "pmid": "19573567", "doi": "10.1016/j.mimet.2009.06.017", "title": "Identification of surface proteins of group B streptococci: serotyping versus genotyping.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Gilbert, Kong. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/19573567/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:19556573", "record_id": "CPD-0593", "year": "2009", "pmid": "19556573", "doi": "", "title": "The effects of sustained release metofluthrin on the biting, movement, and mortality of Aedes aegypti in a domestic setting.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Russell. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/19556573/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:19678756", "record_id": "CPD-0594", "year": "2009", "pmid": "19678756", "doi": "10.1086/605447", "title": "Activation and coagulation biomarkers are independent predictors of the development of opportunistic disease in patients with HIV infection.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "STUDY_GROUP_COLLABORATOR", "basis": "The article is for the INSIGHT SMART Study Group. Its published SMART investigator appendix lists DE Dwyer among Australia clinical site investigators. User-approved group-collaborator rule therefore supports GREEN-A.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/19678756/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:19296793", "record_id": "CPD-0595", "year": "2009", "pmid": "19296793", "doi": "10.5694/j.1326-5377.2009.tb02393.x", "title": "Dengue and climate change in Australia: predictions for the future should incorporate knowledge from the past.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Russell. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/19296793/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:19702582", "record_id": "CPD-0596", "year": "2009", "pmid": "19702582", "doi": "10.1111/j.1750-2659.2009.00101.x", "title": "A review of medical masks and respirators for use during an influenza pandemic.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Dwyer. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/19702582/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:19496650", "record_id": "CPD-0597", "year": "2009", "pmid": "19496650", "doi": "10.1086/599254", "title": "Feasibility exercise to evaluate the use of particulate respirators by emergency department staff during the 2007 influenza season.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Dwyer. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/19496650/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:19453437", "record_id": "CPD-0598", "year": "2009", "pmid": "19453437", "doi": "10.1111/j.1750-2659.2008.00063.x", "title": "The use of oseltamivir during an influenza B outbreak in a chronic care hospital.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Dwyer. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/19453437/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:19552854", "record_id": "CPD-0599", "year": "2009", "pmid": "19552854", "doi": "10.1071/nb08014", "title": "The effectiveness of prophylaxis for measles contacts in NSW.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Dwyer. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/19552854/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:19618764", "record_id": "CPD-0600", "year": "2009", "pmid": "19618764", "doi": "10.33321/cdi.2009.33.3", "title": "Vaccine failures and vaccine effectiveness in children during measles outbreaks in New South Wales, March-May 2006.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Dwyer. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/19618764/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:19492884", "record_id": "CPD-0601", "year": "2009", "pmid": "19492884", "doi": "10.5858/133.6.916", "title": "Laboratory-guided detection of disease outbreaks: three generations of surveillance systems.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Sintchenko. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/19492884/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:19208185", "record_id": "CPD-0602", "year": "2009", "pmid": "19208185", "doi": "10.1186/1471-2105-10-s2-s10", "title": "Towards bioinformatics assisted infectious disease control.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Sintchenko. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/19208185/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:20054979", "record_id": "CPD-0603", "year": "2009", "pmid": "20054979", "doi": "10.1007/978-1-4419-1601-3_9", "title": "Fungal-derived immune modulating molecules.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Sorrell, Chen. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/20054979/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:19800370", "record_id": "CPD-0604", "year": "2009", "pmid": "19800370", "doi": "10.1016/j.antiviral.2009.09.010", "title": "Detection of influenza A H1N1 and H3N2 mutations conferring resistance to oseltamivir using rolling circle amplification.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Dwyer. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/19800370/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:19774693", "record_id": "CPD-0605", "year": "2009", "pmid": "19774693", "doi": "10.1002/jmv.21604", "title": "Evaluation of twenty rapid antigen tests for the detection of human influenza A H5N1, H3N2, H1N1, and B viruses.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Dwyer, McPhie. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/19774693/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:19735578", "record_id": "CPD-0606", "year": "2009", "pmid": "19735578", "doi": "10.1186/1471-2105-10-281", "title": "Context-driven discovery of gene cassettes in mobile integrons using a computational grammar.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Iredell. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/19735578/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:19439533", "record_id": "CPD-0607", "year": "2009", "pmid": "19439533", "doi": "10.1128/jcm.00154-09", "title": "Diversity of group B streptococcus serotypes causing urinary tract infection in adults.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Gilbert, Kong. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/19439533/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:19523982", "record_id": "CPD-0609", "year": "2009", "pmid": "19523982", "doi": "10.1016/j.jviromet.2009.06.004", "title": "Sensitive detection of the K103N non-nucleoside reverse transcriptase inhibitor resistance mutation in treatment-naïve HIV-1 infected individuals by rolling circle amplification.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Dwyer. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/19523982/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:19682357", "record_id": "CPD-0610", "year": "2009", "pmid": "19682357", "doi": "10.1186/1471-2180-9-167", "title": "Rapid detection of ERG11 gene mutations in clinical Candida albicans isolates with reduced susceptibility to fluconazole by rolling circle amplification and DNA sequencing.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Sorrell, Chen, Kong, Widmer. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/19682357/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:19432076", "record_id": "CPD-0612", "year": "2009", "pmid": "19432076", "doi": "10.2987/08-5750.1", "title": "A laboratory investigation of the mosquito control potential of the monomolecular film Aquatain mosquito formula against immature stages of Aedes aegypti and Culex quinquefasciatus.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Russell, Webb. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/19432076/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:19811489", "record_id": "CPD-0613", "year": "2009", "pmid": "19811489", "doi": "10.1111/j.1753-6405.2009.00435.x", "title": "Insect repellents and sunscreen: implications for personal protection strategies against mosquito-borne disease.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Russell, Webb. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/19811489/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:19571022", "record_id": "CPD-0614", "year": "2009", "pmid": "19571022", "doi": "10.1128/jcm.00823-09", "title": "Identification of 20 common human enterovirus serotypes by use of a reverse transcription-PCR-based reverse line blot hybridization assay.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "PubMed: Centre for Infectious Diseases and Microbiology (CIDM), ICPMR, Westmead.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/19571022/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:19139283", "record_id": "CPD-0615", "year": "2009", "pmid": "19139283", "doi": "10.1128/aac.01313-08", "title": "A blaVEB-1 variant, blaVEB-6, associated with repeated elements in a complex genetic structure.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Iredell. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/19139283/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:19220822", "record_id": "CPD-0617", "year": "2009", "pmid": "19220822", "doi": "10.1111/j.1399-3062.2009.00371.x", "title": "Candidemia following solid organ transplantation in the era of antifungal prophylaxis: the Australian experience.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Sorrell, Chen. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/19220822/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:19203393", "record_id": "CPD-0618", "year": "2009", "pmid": "19203393", "doi": "10.1186/1742-4690-6-12", "title": "HIV-1 integrase polymorphisms are associated with prior antiretroviral drug exposure.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Dwyer. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/19203393/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:19420178", "record_id": "CPD-0619", "year": "2009", "pmid": "19420178", "doi": "10.1128/jcm.02141-08", "title": "Immediate appearance of plasmid-mediated resistance to multiple antibiotics upon antibiotic selection: an argument for systematic resistance epidemiology.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Iredell. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/19420178/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:19727401", "record_id": "CPD-0620", "year": "2009", "pmid": "19727401", "doi": "10.1371/journal.pone.0006620", "title": "Influenza outbreak during Sydney World Youth Day 2008: the utility of laboratory testing and case definitions on mass gathering outbreak containment.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Dwyer, Sintchenko, McPhie. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/19727401/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:20374693", "record_id": "CPD-0621", "year": "2010", "pmid": "20374693", "doi": "10.1071/nb09041", "title": "Lessons from the NSW laboratory response to pandemic (H1N1) 2009 influenza.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Dwyer. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/20374693/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:20357093", "record_id": "CPD-0622", "year": "2010", "pmid": "20357093", "doi": "10.1128/jvi.02658-09", "title": "Whole-genome characterization and genotyping of global WU polyomavirus strains.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Sorrell. Classified GREEN-A without requiring an explicit CIDM affiliation string. 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Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/23041813/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:22895043", "record_id": "CPD-0824", "year": "2012", "pmid": "22895043", "doi": "10.1128/jcm.01625-12", "title": "Prospective genotyping of hospital-acquired methicillin-resistant Staphylococcus aureus isolates by use of a novel, highly discriminatory binary typing system.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "PubMed: Centre for Infectious Diseases and Microbiology, Sydney Medical School, University of Sydney, Westmead Hospital.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/22895043/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:22416243", "record_id": "CPD-0825", "year": "2012", "pmid": "22416243", "doi": "10.1093/infdis/jis178", "title": "Newly emerging clones of Bordetella pertussis carrying prn2 and ptxP3 alleles implicated in Australian pertussis epidemic in 2008-2010.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Gilbert, Sintchenko. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/22416243/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:22708769", "record_id": "CPD-0826", "year": "2012", "pmid": "22708769", "doi": "10.5694/mja11.10533", "title": "Coccidioidal septic arthritis: lessons learned from a clinical and laboratory perspective.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "PubMed: Centre for Infectious Diseases and Microbiology, Westmead and Blacktown Hospitals.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/22708769/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:22205813", "record_id": "CPD-0827", "year": "2012", "pmid": "22205813", "doi": "10.1128/jcm.01284-11", "title": "Genetic relationships of phage types and single nucleotide polymorphism typing of Salmonella enterica Serovar Typhimurium.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Gilbert, Sintchenko. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/22205813/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:23074228", "record_id": "CPD-0828", "year": "2012", "pmid": "23074228", "doi": "10.1128/aac.00117-12", "title": "Genetic contexts of blaNDM-1.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Iredell. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/23074228/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:22926566", "record_id": "CPD-0829", "year": "2012", "pmid": "22926566", "doi": "10.1128/aac.01189-12", "title": "pEl1573 Carrying blaIMP-4, from Sydney, Australia, is closely related to other IncL/M plasmids.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Iredell. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/22926566/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:22252811", "record_id": "CPD-0830", "year": "2012", "pmid": "22252811", "doi": "10.1128/aac.05796-11", "title": "pJIE137 carrying blaCTX-M-62 is closely related to p271A carrying blaNDM-1.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Iredell. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/22252811/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:23401942", "record_id": "CPD-0831", "year": "2012", "pmid": "23401942", "doi": "10.2987/8756-971x-28.4s.24", "title": "A review of the status and significance of the species within the Culex pipiens group in Australia.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Russell. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/23401942/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:20460279", "record_id": "CPD-0832", "year": "2012", "pmid": "20460279", "doi": "10.1177/1010539510365097", "title": "Hospital health care workers' understanding of and attitudes toward pandemic influenza in Beijing.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Dwyer. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/20460279/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:22084489", "record_id": "CPD-0833", "year": "2012", "pmid": "22084489", "doi": "10.1177/1352458511428081", "title": "Anti-HHV-6 IgG titer significantly predicts subsequent relapse risk in multiple sclerosis.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Dwyer. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/22084489/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:22462487", "record_id": "CPD-0834", "year": "2012", "pmid": "22462487", "doi": "10.1186/1471-2334-12-78", "title": "Improving resolution of public health surveillance for human Salmonella enterica serovar Typhimurium infection: 3 years of prospective multiple-locus variable-number tandem-repeat analysis (MLVA).", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Gilbert, Sintchenko. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/22462487/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:22621152", "record_id": "CPD-0835", "year": "2012", "pmid": "22621152", "doi": "10.5694/mja11.10755", "title": "Sporotrichosis (Sporothrix schenckii infection) in the New South Wales mid-north coast, 2000-2010.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Chen. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/22621152/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:22554644", "record_id": "CPD-0836", "year": "2012", "pmid": "22554644", "doi": "10.1016/j.vaccine.2012.04.025", "title": "Current epidemiology of rubella and congenital rubella syndrome in Australia: progress towards elimination.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Gilbert. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/22554644/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:21848709", "record_id": "CPD-0837", "year": "2012", "pmid": "21848709", "doi": "10.1111/j.1440-1843.2011.02035.x", "title": "Pleural fluid nucleic acid testing enhances pneumococcal surveillance in children.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Gilbert. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/21848709/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:22813776", "record_id": "CPD-0838", "year": "2012", "pmid": "22813776", "doi": "10.1017/s0031182012000753", "title": "Seroepidemiology of Strongyloides stercoralis in Dhaka, Bangladesh.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Gilbert, Lee. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/22813776/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:23084030", "record_id": "CPD-0839", "year": "2012", "pmid": "23084030", "doi": "10.1016/j.trstmh.2012.08.011", "title": "Strongyloidiasis in a high risk community of Dhaka, Bangladesh.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Gilbert, Lee. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/23084030/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:22790606", "record_id": "CPD-0841", "year": "2012", "pmid": "22790606", "doi": "10.2807/ese.17.27.20210-en", "title": "Frequency of oseltamivir resistance in Sydney, during the Newcastle outbreak of community transmitted oseltamivir-resistant influenza A(H1N1)pdm09 virus, Australia, June to August 2011.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Dwyer, McPhie. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/22790606/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:23035204", "record_id": "CPD-0842", "year": "2012", "pmid": "23035204", "doi": "10.1128/jcm.01130-12", "title": "In vitro susceptibilities of yeast species to fluconazole and voriconazole as determined by the 2010 National China Hospital Invasive Fungal Surveillance Net (CHIF-NET) study.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Chen, Kong. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/23035204/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:22926286", "record_id": "CPD-0843", "year": "2012", "pmid": "22926286", "doi": "10.1016/j.tmaid.2012.08.001", "title": "Can travellers avoid bed bug bites?", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Webb, Doggett. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/22926286/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:22533087", "record_id": "CPD-0844", "year": "2012", "pmid": "22533087", "doi": "10.2987/11-6193.1", "title": "Does the monomolecular film aquatain mosquito formula provide effective control of container-breeding mosquitoes in Australia?", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Russell, Webb. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/22533087/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:23153083", "record_id": "CPD-0845", "year": "2012", "pmid": "23153083", "doi": "10.33321/cdi.2012.36.2", "title": "Arboviral diseases and malaria in Australia, 2009-10: annual report of the National Arbovirus and Malaria Advisory Committee.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "COLLABORATOR_CORE_PERSON", "basis": "PubMed expands the National Arbovirus and Malaria Advisory Committee and lists Richard Russell. Historical provenance verifies Richard C. Russell as CIDM Medical Entomology founding director. GREEN-A under verified-core-person collaborator rule.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/23153083/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:22692737", "record_id": "CPD-0846", "year": "2012", "pmid": "22692737", "doi": "10.1128/jcm.00777-12", "title": "Comparison of two capillary gel electrophoresis systems for Clostridium difficile ribotyping, using a panel of ribotype 027 isolates and whole-genome sequences as a reference standard.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Gilbert, Kong. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/22692737/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:22917096", "record_id": "CPD-0847", "year": "2012", "pmid": "22917096", "doi": "10.1016/s1473-3099(12)70184-6", "title": "Quantifying the efficacy of influenza vaccines.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Dwyer. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/22917096/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:24890971", "record_id": "CPD-0848", "year": "2013", "pmid": "24890971", "doi": "10.33321/cdi.2013.37.47", "title": "Invasive pneumococcal disease surveillance Australia, 1 April to 30 June 2013.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "STUDY_GROUP_COLLABORATOR", "basis": "PubMed expands the Enhanced Invasive Pneumococcal Disease Surveillance Working Group and lists Vitali Sintchenko. Sintchenko is verified CIDM core; group collaborator authorship qualifies as GREEN-A.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/24890971/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:23951380", "record_id": "CPD-0849", "year": "2013", "pmid": "23951380", "doi": "10.1371/journal.pntd.0002361. ecollection 2013", "title": "Tracing the tiger: population genetics provides valuable insights into the Aedes (Stegomyia) albopictus invasion of the Australasian Region.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Russell. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/23951380/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:24076076", "record_id": "CPD-0850", "year": "2013", "pmid": "24076076", "doi": "10.1016/j.fgb.2013.09.005", "title": "Functional characterization of the hexose transporter Hxt13p: an efflux pump that mediates resistance to miltefosine in yeast.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Sorrell, Chen. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/24076076/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:23861311", "record_id": "CPD-0851", "year": "2013", "pmid": "23861311", "doi": "10.1093/jac/dkt282", "title": "In vitro activity of miltefosine as a single agent and in combination with voriconazole or posaconazole against uncommon filamentous fungal pathogens.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Sorrell, Chen. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/23861311/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:23457535", "record_id": "CPD-0852", "year": "2013", "pmid": "23457535", "doi": "10.1371/journal.pone.0056249", "title": "Biomarkers and bacterial pneumonia risk in patients with treated HIV infection: a case-control study.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "STUDY_GROUP_COLLABORATOR", "basis": "The paper is explicitly for the INSIGHT SMART Study Group. The SMART investigator roster used by this study family lists DE Dwyer among Australia clinical site investigators. Under the user-approved Dwyer investigator/collaborator rule, classify GREEN-A; same-name safeguard retained.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/23457535/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:22487223", "record_id": "CPD-0853", "year": "2013", "pmid": "22487223", "doi": "10.1111/j.1750-2659.2012.00360.x", "title": "The impact of bacterial and viral co-infection in severe influenza.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Dwyer, Iredell, Kok. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/22487223/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:23739237", "record_id": "CPD-0854", "year": "2013", "pmid": "23739237", "doi": "10.1038/ki.2013.212", "title": "Post-transplant Pneumocystis jirovecii pneumonia--a re-emerged public health problem?", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Chen. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/23739237/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:23697747", "record_id": "CPD-0855", "year": "2013", "pmid": "23697747", "doi": "10.1093/cid/cit341", "title": "Antifungal therapy and management of complications of cryptococcosis due to Cryptococcus gattii.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Sorrell, Chen. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/23697747/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:23874754", "record_id": "CPD-0856", "year": "2013", "pmid": "23874754", "doi": "10.1371/journal.pone.0068760. print 2013", "title": "Influenza vaccine effectiveness against hospitalisation with confirmed influenza in the 2010-11 seasons: a test-negative observational study.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Dwyer. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/23874754/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:23849019", "record_id": "CPD-0857", "year": "2013", "pmid": "23849019", "doi": "10.1071/nb12124", "title": "Tuberculosis, public health and gathering new evidence to guide control efforts.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Sintchenko. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/23849019/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:24052013", "record_id": "CPD-0858", "year": "2013", "pmid": "24052013", "doi": "10.1177/0956462413502008", "title": "Failure of moxifloxacin treatment in Mycoplasma genitalium infections due to macrolide and fluoroquinolone resistance.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Gilbert. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/24052013/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:23468921", "record_id": "CPD-0859", "year": "2013", "pmid": "23468921", "doi": "10.1371/journal.pone.0057121", "title": "The association between serum biomarkers and disease outcome in influenza A(H1N1)pdm09 virus infection: results of two international observational cohort studies.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Dwyer. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/23468921/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:23290385", "record_id": "CPD-0860", "year": "2013", "pmid": "23290385", "doi": "10.1016/j.jcv.2012.11.010", "title": "Human rhinovirus C in adult haematopoietic stem cell transplant recipients with respiratory illness.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "PubMed: Centre for Infectious Diseases and Microbiology, Westmead Hospital.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/23290385/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:23849021", "record_id": "CPD-0861", "year": "2013", "pmid": "23849021", "doi": "10.1071/nb12106", "title": "The use of mycobacterial interspersed repetitive unit typing and whole genome sequencing to inform tuberculosis prevention and control activities.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Gilbert, Sintchenko. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/23849021/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:23706544", "record_id": "CPD-0862", "year": "2013", "pmid": "23706544", "doi": "10.1016/j.ijantimicag.2013.03.003", "title": "Limited diversity in the gene pool allows prediction of third-generation cephalosporin and aminoglycoside resistance in Escherichia coli and Klebsiella pneumoniae.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Iredell. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/23706544/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:23891220", "record_id": "CPD-0863", "year": "2013", "pmid": "23891220", "doi": "10.1016/j.diagmicrobio.2013.06.016", "title": "Rapid identification of Gram-negative organisms from blood culture bottles using a modified extraction method and MALDI-TOF mass spectrometry.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "PubMed: Centre for Infectious Diseases and Microbiology Laboratory Services, ICPMR, Westmead Hospital.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/23891220/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:23759042", "record_id": "CPD-0864", "year": "2013", "pmid": "23759042", "doi": "10.1111/1742-6723.12076", "title": "Blood pressure cuffs as a vector for transmission of multi-resistant organisms: colonisation rates and effects of disinfection.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Kok. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/23759042/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:23534359", "record_id": "CPD-0865", "year": "2013", "pmid": "23534359", "doi": "10.2217/fmb.13.19", "title": "Hendra virus: a one health tale of flying foxes, horses and humans.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Dwyer, Kok. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/23534359/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:23139396", "record_id": "CPD-0866", "year": "2013", "pmid": "23139396", "doi": "10.1099/jmm.0.050385-0", "title": "Rapid identification of Gram-positive pathogens and their resistance genes from positive blood culture broth using a multiplex tandem RT-PCR assay.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Iredell. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/23139396/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:23521060", "record_id": "CPD-0867", "year": "2013", "pmid": "23521060", "doi": "10.1111/tmi.12099", "title": "Diagnosing tuberculous meningitis - have we made any progress?", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Gilbert. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/23521060/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:23335735", "record_id": "CPD-0868", "year": "2013", "pmid": "23335735", "doi": "10.1128/aac.01485-12", "title": "Vancomycin AUC/MIC ratio and 30-day mortality in patients with Staphylococcus aureus bacteremia.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel O'Sullivan. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/23335735/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:23541688", "record_id": "CPD-0869", "year": "2013", "pmid": "23541688", "doi": "10.1016/j.diagmicrobio.2013.02.016", "title": "Genetic diversity and antibiotic resistance in Escherichia coli from environmental surface water in Dhaka City, Bangladesh.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Iredell. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/23541688/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:23122417", "record_id": "CPD-0871", "year": "2013", "pmid": "23122417", "doi": "10.1111/irv.12039", "title": "Comparing the use of, and considering the need for, lumbar puncture in children with influenza or other respiratory virus infections.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Dwyer. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/23122417/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:23692155", "record_id": "CPD-0872", "year": "2013", "pmid": "23692155", "doi": "10.33321/cdi.2013.37.1", "title": "Arboviral diseases and malaria in Australia, 2010-11: annual report of the National Arbovirus and Malaria Advisory Committee.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Doggett. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/23692155/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:23692160", "record_id": "CPD-0873", "year": "2013", "pmid": "23692160", "doi": "10.33321/cdi.2013.37.6", "title": "Increasing notifications of dengue in Australia related to overseas travel, 1991 to 2012.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "STUDY_GROUP_COLLABORATOR", "basis": "PubMed expands the National Arbovirus and Malaria Advisory Committee and lists Stephen Doggett and Richard Russell. Historical CIDM provenance places Russell and Doggett in CIDM/Medical Entomology at Westmead. GREEN-A under verified-person collaborator rule.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/23692160/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:23255029", "record_id": "CPD-0874", "year": "2013", "pmid": "23255029", "doi": "10.1097/pat.0b013e32835be408", "title": "Current status of matrix-assisted laser desorption ionisation-time of flight mass spectrometry in the clinical microbiology laboratory.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Dwyer, Iredell, Kok, Chen. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/23255029/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:23418448", "record_id": "CPD-0875", "year": "2013", "pmid": "23418448", "doi": "10.1371/journal.pone.0055631", "title": "Viral pneumonitis is increased in obese patients during the first wave of pandemic A(H1N1) 2009 virus.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Dwyer, Iredell, Kok. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/23418448/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:23398521", "record_id": "CPD-0876", "year": "2013", "pmid": "23398521", "doi": "10.1111/1469-0691.12123", "title": "Distribution of phylogenetic groups, sequence type ST131, and virulence-associated traits among Escherichia coli isolates from men with pyelonephritis or cystitis and healthy controls.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Gilbert, Kong. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/23398521/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:23885001", "record_id": "CPD-0877", "year": "2013", "pmid": "23885001", "doi": "10.1128/jcm.01315-13", "title": "Escherichia coli sequence type 131 as a prominent cause of antibiotic resistance among urinary Escherichia coli isolates from reproductive-age women.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Gilbert, Kong. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/23885001/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:23429563", "record_id": "CPD-0878", "year": "2013", "pmid": "23429563", "doi": "10.1097/inf.0b013e31828ba3f1", "title": "Genotypic and phenotypic characterization of Escherichia coli isolates from children with urinary tract infection and from healthy carriers.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Gilbert, Kong. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/23429563/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:24008232", "record_id": "CPD-0879", "year": "2013", "pmid": "24008232", "doi": "10.2807/1560-7917.es2013.18.35.20566", "title": "Proof-of-concept study for successful inter-laboratory comparison of MLVA results.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "STUDY_GROUP_COLLABORATOR", "basis": "PubMed expands the MLVA working group and lists Vitali Sintchenko. Verified CIDM core person; collaborator authorship qualifies as GREEN-A.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/24008232/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:24385975", "record_id": "CPD-0880", "year": "2013", "pmid": "24385975", "doi": "10.3389/fmicb.2013.00395. ecollection 2013", "title": "The global establishment of a highly-fluoroquinolone resistant Salmonella enterica serotype Kentucky ST198 strain.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Sintchenko. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/24385975/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:23274624", "record_id": "CPD-0881", "year": "2013", "pmid": "23274624", "doi": "10.1016/j.antiviral.2012.12.016", "title": "Influenza antiviral resistance in the Asia-Pacific region during 2011.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Dwyer. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/23274624/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:23381992", "record_id": "CPD-0882", "year": "2013", "pmid": "23381992", "doi": "10.1128/iai.01421-12", "title": "Phospholipase C of Cryptococcus neoformans regulates homeostasis and virulence by providing inositol trisphosphate as a substrate for Arg1 kinase.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Sorrell. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/23381992/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:23340566", "record_id": "CPD-0884", "year": "2013", "pmid": "23340566", "doi": "10.1097/inf.0b013e31828637b1", "title": "Etiology of empyema thoracis and parapneumonic pleural effusion in Taiwanese children and adolescents younger than 18 years of age.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Gilbert. Classified GREEN-A without requiring an explicit CIDM affiliation string. 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Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/23392822/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:23260059", "record_id": "CPD-0920", "year": "2013", "pmid": "23260059", "doi": "10.3201/eid1901.111643", "title": "Seroepidemiologic effects of influenza A(H1N1)pdm09 in Australia, New Zealand, and Singapore.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Dwyer, Kok. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/23260059/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:23570433", "record_id": "CPD-0921", "year": "2013", "pmid": "23570433", "doi": "10.1586/erp.13.3", "title": "Pharmacoeconomics of empirical antifungal use in febrile neutropenic hematological malignancy and hematopoietic stem cell transplant patients.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Chen. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/23570433/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:23331969", "record_id": "CPD-0922", "year": "2013", "pmid": "23331969", "doi": "10.1111/irv.12074", "title": "Estimating age-specific cumulative incidence for the 2009 influenza pandemic: a meta-analysis of A(H1N1)pdm09 serological studies from 19 countries.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "STUDY_GROUP_COLLABORATOR", "basis": "PubMed expands the H1N1pdm serology working group and lists Gwendolyn L Gilbert. Gilbert is verified CIDM core; collaborator authorship qualifies as GREEN-A.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/23331969/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:23165465", "record_id": "CPD-0923", "year": "2013", "pmid": "23165465", "doi": "10.1128/aac.01624-12", "title": "Limited activity of miltefosine in murine models of cryptococcal meningoencephalitis and disseminated cryptococcosis.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Sorrell. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/23165465/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:23158100", "record_id": "CPD-0924", "year": "2013", "pmid": "23158100", "doi": "10.1016/j.virol.2012.10.026", "title": "Transcriptome analysis of primary monocytes shows global down-regulation of genetic networks in HIV viremic patients versus long-term non-progressors.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Dwyer. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/23158100/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:24018815", "record_id": "CPD-0925", "year": "2013", "pmid": "24018815", "doi": "10.1097/pat.0b013e3283650c37", "title": "Multiplex PCR targeting slpA: a rapid screening method to predict common Clostridium difficile ribotypes among fluoroquinolone resistant clinical strains.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Gilbert, Kong. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/24018815/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:23985906", "record_id": "CPD-0926", "year": "2013", "pmid": "23985906", "doi": "10.1128/jcm.01375-13", "title": "National surveillance of methicillin-resistant Staphylococcus aureus in China highlights a still-evolving epidemiology with 15 novel emerging multilocus sequence types.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Kong, O'Sullivan. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/23985906/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:23186014", "record_id": "CPD-0927", "year": "2013", "pmid": "23186014", "doi": "10.3109/13693786.2012.723223", "title": "Practical identification of eight medically important Trichosporon species by reverse line blot hybridization (RLB) assay and rolling circle amplification (RCA).", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate record contains confirmed core CIDM personnel Sorrell, Chen, Kong. Classified GREEN-A without requiring an explicit CIDM affiliation string. Same-name/identity safeguard remains part of provenance.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/23186014/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:23018440", "record_id": "CPD-0928", "year": "2013", "pmid": "23018440", "doi": "10.1097/qad.0b013e32835a104d", "title": "Platelet count kinetics following interruption of antiretroviral treatment.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "STUDY_GROUP_COLLABORATOR", "basis": "The paper is for the INSIGHT SMART Study Group. Published SMART investigator rosters list DE Dwyer among Australia clinical site investigators. User-approved Dwyer collaborator rule supports GREEN-A; same-name safeguard retained.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/23018440/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:24882249", "record_id": "CPD-0929", "year": "2013", "pmid": "24882249", "doi": "10.33321/cdi.2013.37.63", "title": "Invasive pneumococcal disease surveillance Australia, 1 July to 30 September 2013.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "STUDY_GROUP_COLLABORATOR", "basis": "PubMed expands the Enhanced Invasive Pneumococcal Disease Surveillance Working Group and lists Vitali Sintchenko. Verified CIDM core; group collaborator authorship qualifies as GREEN-A.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/24882249/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:21249145", "record_id": "NEW-2011-01", "year": "2011", "pmid": "21249145", "doi": "10.1371/journal.pone.0016076", "title": "Cryptococcus gattii virulence composite: candidate genes revealed by microarray analysis of high and less virulent Vancouver Island outbreak strains", "class": "GREEN-A_VERIFIED", "action": "ADD_TO_MAIN", "evidence_type": "NEW_RECOVERY", "basis": "Recovered omission. PubMed explicitly: Molecular Mycology Research Laboratory, Centre for Infectious Diseases and Microbiology, Sydney Medical School-Westmead, University of Sydney, Westmead Hospital.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/21249145/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:19523304", "record_id": "CPD-0611", "year": "2009", "pmid": "19523304", "doi": "10.3201/eid1506.080855", "title": "Diagnosis of Queensland tick typhus and African tick bite fever by PCR of lesion swabs.", "class": "PERIPHERAL_PROVENANCE", "action": "MOVE_TO_PERIPHERAL", "evidence_type": "DENOMINATOR_HOLD_NOT_SUBTRACT", "basis": "PubMed lists Wang, Hudson, Watts, Karagiannis, Fisher, Anderson and Roffey, with Royal North Shore Hospital affiliation. No verified core CIDM author/collaborator was recovered for this paper. Preserve as peripheral historical candidate; do not count in main corpus.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/19523304/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:21658233", "record_id": "CPD-0700", "year": "2011", "pmid": "21658233", "doi": "10.1186/cc10266", "title": "Critical care services and the H1N1 (2009) influenza epidemic in Australia and New Zealand in 2010: the impact of the second winter epidemic.", "class": "PERIPHERAL_PROVENANCE", "action": "MOVE_TO_PERIPHERAL", "evidence_type": "DENOMINATOR_HOLD_NOT_SUBTRACT", "basis": "The ANZIC Influenza article's named author group does not establish a verified core CIDM author. Full text thanks J. Iredell as a Management Committee member 'for reading the article'; this is acknowledgement, not authorship/collaborator attribution. Preserve peripherally; do not promote on acknowledgement alone.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/21658233/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:22571310", "record_id": "CPD-0796", "year": "2012", "pmid": "22571310", "doi": "10.5694/mja11.11570", "title": "Extensive cystic hydatid disease.", "class": "PERIPHERAL_PROVENANCE", "action": "MOVE_TO_PERIPHERAL", "evidence_type": "DENOMINATOR_HOLD_NOT_SUBTRACT", "basis": "PubMed lists Figtree, Watts, Timmins, Smith and Hudson with Royal North Shore Hospital affiliation. No verified core CIDM author/collaborator was recovered. Preserve as peripheral provenance only.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/22571310/", "period": "2009–2013", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:25019233", "record_id": "CPD-0931", "year": "2014", "pmid": "25019233", "doi": "10.2174/1871526514666140713161757", "title": "Knowledge, Attitude and Practice (KAP) Survey Concerning Antimicrobial Use among Australian Hajj Pilgrims.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate lineage contains confirmed core CIDM personnel Dwyer DE. Classified GREEN-A without requiring an explicit CIDM affiliation string; same-name/identity safeguards retained.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/25019233/", "period": "2014–2018", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:25222449", "record_id": "CPD-0932", "year": "2014", "pmid": "25222449", "doi": "10.5694/mja14.01151", "title": "Vulnerability, hysteria and fear - conquering Ebola virus.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate lineage contains confirmed core CIDM personnel Sorrell TC. Classified GREEN-A without requiring an explicit CIDM affiliation string; same-name/identity safeguards retained.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/25222449/", "period": "2014–2018", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:25145836", "record_id": "CPD-0933", "year": "2014", "pmid": "25145836", "doi": "10.1111/jtm.12146", "title": "Influenza vaccination among Australian Hajj pilgrims: uptake, attitudes, and barriers.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate lineage contains confirmed core CIDM personnel Dwyer DE. Classified GREEN-A without requiring an explicit CIDM affiliation string; same-name/identity safeguards retained.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/25145836/", "period": "2014–2018", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:25336079", "record_id": "CPD-0934", "year": "2014", "pmid": "25336079", "doi": "10.2174/1871526514666141021112855", "title": "Pilot Randomised Controlled Trial to Test Effectiveness of Facemasks in Preventing Influenza-like Illness Transmission among Australian Hajj Pilgrims in 2011.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate lineage contains confirmed core CIDM personnel Dwyer DE. Classified GREEN-A without requiring an explicit CIDM affiliation string; same-name/identity safeguards retained.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/25336079/", "period": "2014–2018", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:25413828", "record_id": "CPD-0935", "year": "2014", "pmid": "25413828", "doi": "10.1007/s12250-014-3507-x", "title": "Viral respiratory infections among Hajj pilgrims in 2013.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate lineage contains confirmed core CIDM personnel Dwyer DE. Classified GREEN-A without requiring an explicit CIDM affiliation string; same-name/identity safeguards retained.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/25413828/", "period": "2014–2018", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:24757216", "record_id": "CPD-0936", "year": "2014", "pmid": "24757216", "doi": "10.1128/mbio.01074-14", "title": "Global population structure and evolution of Bordetella pertussis and their relationship with vaccination.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate lineage contains confirmed core CIDM personnel Sintchenko V. Classified GREEN-A without requiring an explicit CIDM affiliation string; same-name/identity safeguards retained.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/24757216/", "period": "2014–2018", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:24731805", "record_id": "CPD-0937", "year": "2014", "pmid": "24731805", "doi": "10.1016/j.fgb.2014.04.003", "title": "Functional disruption of yeast metacaspase, Mca1, leads to miltefosine resistance and inability to mediate miltefosine-induced apoptotic effects.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate lineage contains confirmed core CIDM personnel Sorrell TC. Classified GREEN-A without requiring an explicit CIDM affiliation string; same-name/identity safeguards retained.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/24731805/", "period": "2014–2018", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:24626096", "record_id": "CPD-0938", "year": "2014", "pmid": "24626096", "doi": "10.1371/journal.pone.0090978. ecollection 2014", "title": "Factors associated with D-dimer levels in HIV-infected individuals.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate lineage contains confirmed core CIDM personnel Dwyer DE. Classified GREEN-A without requiring an explicit CIDM affiliation string; same-name/identity safeguards retained.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/24626096/", "period": "2014–2018", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:25356332", "record_id": "CPD-0939", "year": "2014", "pmid": "25356332", "doi": "10.1002/2052-2975.29", "title": "Clinical features of endemic community-acquired psittacosis.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate lineage contains confirmed core CIDM personnel Dwyer DE, Sorrell TC. Classified GREEN-A without requiring an explicit CIDM affiliation string; same-name/identity safeguards retained.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/25356332/", "period": "2014–2018", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:24575943", "record_id": "CPD-0940", "year": "2014", "pmid": "24575943", "doi": "10.1111/ajo.12145", "title": "Rapid identification of group B streptococcus carriage by PCR to assist in the management of women with prelabour rupture of membranes in term pregnancy.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate lineage contains confirmed core CIDM personnel Gilbert GL. Classified GREEN-A without requiring an explicit CIDM affiliation string; same-name/identity safeguards retained.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/24575943/", "period": "2014–2018", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:25482743", "record_id": "CPD-0941", "year": "2014", "pmid": "25482743", "doi": "10.1111/imj.12597", "title": "Consensus guidelines for the treatment of yeast infections in the haematology, oncology and intensive care setting, 2014.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate lineage contains confirmed core CIDM personnel Sorrell TC. Classified GREEN-A without requiring an explicit CIDM affiliation string; same-name/identity safeguards retained.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/25482743/", "period": "2014–2018", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:25278580", "record_id": "CPD-0942", "year": "2014", "pmid": "25278580", "doi": "10.1128/cmr.00126-13", "title": "Cryptococcus gattii infections.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate lineage contains confirmed core CIDM personnel Sorrell TC. Classified GREEN-A without requiring an explicit CIDM affiliation string; same-name/identity safeguards retained.", "source_url": "https://pubmed.ncbi.nlm.nih.gov/25278580/", "period": "2014–2018", "denominator_state": "ACTIVE", "layer": "STRICT_BASE_1778", "source_checkpoint": "CIDM_RC72_StrictBase_Active1778_v1.0" }, { "key": "PMID:24574296", "record_id": "CPD-0943", "year": "2014", "pmid": "24574296", "doi": "10.1128/jcm.00065-14", "title": "Rolling circle amplification for direct detection of rpoB gene mutations in Mycobacterium tuberculosis isolates from clinical specimens.", "class": "GREEN-A_VERIFIED", "action": "RETAIN", "evidence_type": "INHERITED_DIRECT", "basis": "Core-CIDM author rule: verified candidate lineage contains confirmed core CIDM personnel Gilbert GL. 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