Full-text teaching cases

Cases are selected preferentially from papers with lawful public full text and direct source-return evidence. They are teaching examples, not awards for “perfect” papers.

CIDM-WORK-1772 · FULL

Panfungal PCR systematic review and meta-analysis

Transparent protocol/search, QUADAS-2, random-effects pooling, subgroup denominators and residual heterogeneity.

Open source article ↗
CIDM-WORK-1439 · FULL

Candida tropicalis WGS + phenotypic susceptibility

Genotype interpreted alongside MIC/CLSI phenotype; sampling and genotype-phenotype boundaries remain visible.

Open source article ↗
CIDM-WORK-1644 · FULL

Prospective routine Mycobacterium tuberculosis sequencing

Explicit 1,831-patient denominator, genomic workflow and bounded inference.

Open source article ↗
CIDM-WORK-1502 · FULL

WGS-guided MDR/XDR-TB management systematic review

Evidence synthesis that retains heterogeneity and limited direct causal outcome evidence.

Open source article ↗
CIDM-WORK-1668 · FULL

Large-scale Salmonella Typhimurium AMR genomics

Genome-scale predicted resistance remains distinct from isolate-level phenotype.

Open source article ↗
CIDM-WORK-1704 · FULL

Australian One Health E. coli genomic analysis

Cross-sector genomic linkage is not automatically direct transmission.

Open source article ↗